Package: Autoseed 0.1.0

Autoseed: Retrieve Disease-Related Genes from Public Sources

For researchers to quickly and comprehensively acquire disease genes, so as to understand the mechanism of disease, we developed this program to acquire disease-related genes. The data is integrated from three public databases. The three databases are 'eDGAR', 'DrugBank' and 'MalaCards'. The 'eDGAR' is a comprehensive database, containing data on the relationship between disease and genes. 'DrugBank' contains information on 13443 drugs and 5157 targets. 'MalaCards' integrates human disease information, including disease-related genes.

Authors:Jiawei Wu [aut, cre], Xu Li [aut]

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Autoseed_0.1.0.tgz(r-4.4-any)Autoseed_0.1.0.tgz(r-4.3-any)
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Autoseed.pdf |Autoseed.html
Autoseed/json (API)

# Install 'Autoseed' in R:
install.packages('Autoseed', repos = c('https://jaredrecords.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • drugbank - Relationship between gene and disease
  • edgar - Relationship between the gene and disease in edgar
  • mala - The relationship between gene and disease

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

4 exports 1.00 score 0 dependencies 3 mentions 178 downloads

Last updated 4 years agofrom:7b349aa176. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 03 2024
R-4.5-winOKSep 03 2024
R-4.5-linuxOKSep 03 2024
R-4.4-winOKSep 03 2024
R-4.4-macOKSep 03 2024
R-4.3-winOKSep 03 2024
R-4.3-macOKSep 03 2024

Exports:AutoSeeddrugbank_disease_geneedgar_disease_genemalacards_disease_gene

Dependencies: